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charless fowlkesCharless Fowlkes
Associate Professor in Computer Science and Biomedical Engineering
My research is in computational vision, in particular how to integrate mechanisms for visual recognition and perceptual organization. I also work on developing tools for biological image and shape analysis in order to measure morphology and spatial patterns of gene expression in developing animals.
 
 
 
 
michelle digmanMichelle  Digman
Assistant Professor in Biomedical Engineering
My research interests focus on: i) quantifying spatial and temporal dynamics of proteins during cell migration, ii) characterizing metabolic alterations in cells and tissues and iii) developing novel imaging technologies.
 
 
enrico grattonEnrico Gratton
Professor in Biomedical Engineering
My research interests are in the development of time-resolved fluorescence instrumentation and theory using frequency domain methods.
 
  
 
xxieXiaohui Xie
Professor in Computer Science
My research interests are in machine learning, neural computation, computational biology, genomics, bioinformatics and applied math.
 
 
 
 
moonjinewGopi Meenakshisundaram
Professor in Computer Science
My research work focuses mainly on topics related to geometry and topology motivated by
problems in computer graphics and interactive rendering. Currently, I am also working on
medical and biological image processing and visualization.
 
 
 
padhraic smythPadhraic Smyth
Professor in Computer Science
My work focuses on machine learning, pattern recognition and statistics.
 
 
 
 
 
Guest Lecturers:
oliviercinquin2Olivier Cinquin
Assistant Professor in Developmental and Cell Biology, UC Irvine
My research explores developmental biology regulatory networks. We utilize the C. elegans germline as a model system and use quanitative imaging of morphological markers and expression patterns to explore and develop models for cellular differentiation switches.
 
 
 
VG2016Viviana Gradinaru
Professor, Division of Biology and Biological Engineering, Caltech
My lab uses advanced technologies such as optogenetics, CLAIRTY, physiology, imaging and behavior to understand and develop therapies for neurological diseases.
 
 
 
 
JoelSchwartzJoel Schwartz
CEO of Schwozny Analytics
Our company provides services and solutions for big data image analysis, management and visualization using the open-source image analysis platform Bisque.
 
 
 
 
Course Organization
felixgrunFelix Grün
Project Scientist & Course Coordinator
I am an experienced research scientist with a broad interdisciplinary background focused on nuclear hormone receptor siganling, endocrine disruption and systems biology. Since 2009, I have served as the Academic Coordinator for the Center for Complex Biological Systems where I implement a variety of educational and training activities including national short courses.
 
 
Teaching Assistants
Nitin Agarwal Zachary Butler Jia Chen Christoph Gohlke  
Shu Kong Jihyun Park Chrisopher Rackauckas Yeling Scott Vang Wentao Zhu 
 
 
 
 
 
 

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